[Bioperl-l] update: genpept module

Dimitar Kenanov dimitark at bii.a-star.edu.sg
Thu Nov 25 02:38:52 UTC 2010


Hi guys,
just managed to get GenPept to give me the fasta in the full form. I 
modified GenPept in this way:

sub new {
   my($class, @args) = @_;
   my $self = $class->SUPER::new(@args);
   my ($verbose,$format)=$self->_rearrange([qw(VERBOSE FORMAT)], at args); 
#DIMITAR
   $DEFAULTFORMAT='fasta' if (defined $format); #DIMITAR
   $self->request_format($self->default_format($format));
   return $self;
}

Cheers
Dimitar



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