[Bioperl-l] Restriction Enzymes

Dave Messina David.Messina at sbc.su.se
Mon May 24 15:55:45 UTC 2010


Hi Nick,

Now it's Bio::Restriction::Enzyme (and friends). Besides the perldoc for that module, see also:

http://www.bioperl.org/wiki/BioPerl_Tutorial#Identifying_restriction_enzyme_sites_.28Bio::Restriction.29


> How hard would it be to keep things backward compatible.
> Have I missed something here?

I don't know the history of the change, but the Bio::Tools::RestrictionEnzyme was deprecated in BioPerl 1.5.2 (2006?). According to the docs the new ones are intended to be at least partially backwards compatible.


Dave





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