[Bioperl-l] Bio-SCF from CPAN == error installation

Jessica Sun jessica.sun at gmail.com
Thu Mar 11 20:49:49 UTC 2010


Thanks, I got it resolve.

Do any one knows how to add a scale of the blast hit image through
Bio:Graphics, I mean the rectangle should be difference width rather than
the same at the example. shown here

http://www.bioperl.org/wiki/HOWTO:Graphics



Thanks,



On Thu, Mar 11, 2010 at 3:02 PM, Robert Buels <rmb32 at cornell.edu> wrote:

> Hello Jessica,
>
> For Bio-SCF, you have to have the staden package installed.  See the
> INSTALL notes included in the Bio-SCF distribution.
>
> The easiest way to view the INSTALL notes for a perl module's distribution:
>  - go to http://search.cpan.org/
>  - search for 'Bio::SCF'
>  - click the link to the Bio-SCF-1.03 distribution you see in the search
> results
>  - the page linked here describes the installation package that Bio::SCF
> comes in.
>  - On that page, you will see a link to the INSTALL notes for it.
>
> This is a good thing to know how to do when you have problems with other
> perl modules as well.
>
>
> But yes, as Chris said, those installation notes direct you to install the
> staden io-lib libraries from staden.sourceforge.net.
>
> Rob
>
> Jessica Sun wrote:
>
>> *I downloaded module
>>
>> *>* > Bio-SCF from CPAN.
>> *>* > And I am trying to install it when I got the following error. Can
>> *>* someone help? Thanks much in advance
>> Note (probably harmless): No library found for -lstaden-read
>> Writing Makefile for Bio::SCF
>>
>> how to obtain the missing library
>>
>>
>> *
>>
>>
>>
>>
>


-- 
Jessica Jingping Sun



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