[Bioperl-l] Problems installing latest stable bioperl-db (1.6)

Mark A. Jensen maj at fortinbras.us
Wed Sep 23 15:36:59 UTC 2009


hi Tony- missing prereqs are the issue with this message,yes-
the brute force approach would be to install each of these
as they come up; you can do

$ cpan
cpan> install Array::Compare

etc., then attempt the bioperl-db install again; lather, rinse, repeat.
MAJ
----- Original Message ----- 
From: "Anthony Pemberton" <A.J.Pemberton at bham.ac.uk>
To: <bioperl-l at bioperl.org>
Sent: Tuesday, September 22, 2009 1:06 PM
Subject: [Bioperl-l] Problems installing latest stable bioperl-db (1.6)


> Folks,
>
> I am experiencing problems installing bioperl-db. I followed the instructions 
> on the website both installing via CPAN and downloading the source tarball. 
> Get the same error. I think I have missing prerequistes, the first error I get 
> is:
>
> Can't locate Array/Compare.pm in @INC (@INC contains: t/lib t 
> /usr/local/BioPerl-db-1.6.0/blib/lib
> /usr/local/BioPerl-db-1.6.0/blib/arch /usr/local/BioPerl-db-1.6.0 
> /usr/lib64/perl5/5.8.5/x86_64-linux-thread-multi
> /usr/lib/perl5/5.8.5 
> /usr/lib64/perl5/site_perl/5.8.5/x86_64-linux-thread-multi 
> /usr/lib/perl5/site_perl/5.8.5
> /usr/lib/perl5/site_perl 
> /usr/lib64/perl5/vendor_perl/5.8.5/x86_64-linux-thread-multi 
> /usr/lib/perl5/vendor_perl/5.8.5
> /usr/lib64/perl5/vendor_perl/5.8.3/x86_64-linux-thread-multi 
> /usr/lib/perl5/vendor_perl .) at t/lib/Test/Warn.pm line 228.
>
> Can anyone help?
>
> Regards,
>
> Tony P.
>
>
> **************************************************************
> Mr. A. Pemberton Tel:+44 121 414 3388
> School of Biosciences, Fax:+44 121 414 5925
> The University of Birmingham                    Email:a.j.pemberton at bham.ac.uk
> Birmingham B15 2TT U.K.
> **************************************************************
>
>
>
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