[Bioperl-l] identifying accession number's database

Hilmar Lapp hlapp at gmx.net
Sat Oct 24 23:17:08 UTC 2009


I know that a former coworker of mine (Serge, copied) has written Perl  
code that guesses for quite a number of possible sources. I don't know  
whether any of it is available somewhere.

-hilmar

Sent from my iPod

On Oct 24, 2009, at 10:19 AM, "Mark A. Jensen" <maj at fortinbras.us>  
wrote:

> (sounds like a good project....Bio::DB::GuessDB...)
> ----- Original Message ----- From: "Chase Miller" <chmille4 at gmail.com>
> To: "BioPerl List" <Bioperl-l at lists.open-bio.org>
> Sent: Saturday, October 24, 2009 9:03 AM
> Subject: [Bioperl-l] identifying accession number's database
>
>
>> Hi all,
>> I have a list of accession numbers which could be from several
>> databases(e.g. NCBI, UniProt, Ensemble).  Does anyone know of a way  
>> I can
>> determine which database a particular accession number is from?
>> thanks,
>> Chase
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