[Bioperl-l] Bioperl not available from bioperl.org/DIST through package manager???

Chris Fields cjfields at illinois.edu
Sat Oct 17 16:15:36 UTC 2009


The package.xml should be found automatically (i.e. the repo path  
shouldn't be explicit).  Just curious, but are you running ActivePerl  
5.10.0 or 5.10.1?  On windows?

chris

On Oct 17, 2009, at 10:35 AM, joris meys wrote:

> I found the problem. Refreshing, removing and readding the
> repository, and even a complete reboot of the computer doesn't help.
> Yet, It works when specifying :
>
> BioPerl-Regular Releases : http://bioperl.org/DIST/package.xml
> as a repository.
>
> I think this should be adjusted on the installation page in the WIKI.
> http://bioperl.open-bio.org/wiki/Installing_Bioperl_on_Windows
>
> Cheers
> Joris
>
> On Sat, Oct 17, 2009 at 3:47 PM, joris meys <jorismeys at gmail.com>  
> wrote:
>> Dear all,
>>
>> I have to update my version of bioperl, but my package manager  
>> doesn't
>> seem to find it. I have following repositories in my list :
>>
>> ActiveState Package Repository :
>> http://ppm4.activestate.com/MSWin32-x86/5.10/1004/package.xml (11.456
>> packages)
>> BioPerl-Release Candidates : http://bioperl.org/DIST/RC (3 packages)
>> BioPerl-Regular Releases : http://bioperl.org/DIST (0 packages)  -->
>> how so, 0 packages???
>>
>> CHecked the site, and the ppd file for BioPerl is there. Yet, somehow
>> the package manager says it's not. Anybody a clue as to what is wrong
>> here?
>>
>> Working with ActiveState Perl 5.10.0
>>
>> Cheers
>> Joris
>>
>
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