[Bioperl-l] Parsing blast with Bio::SearchIO::get_aln

Mgavi Brathwaite lsbrath at gmail.com
Fri May 22 03:41:39 UTC 2009


Hello,

I am parsing a blast report. My script is returning the following output
to file:

Name: 13414|HD
Percent Identity:  100
Alignment:  Bio::SimpleAlign=HASH(0x40d0ac4)
How do I access " Bio::SimpleAlign=HASH(0x40d0ac4)" actual alignment for
this object?

LomSpace



More information about the Bioperl-l mailing list