[Bioperl-l] Bioperl candidate 1.6 release

Wesley Arthur wesleyarthur at optusnet.com.au
Fri Dec 26 11:19:19 UTC 2008


JESUS is LORD!

To Chris Fields and the Bioperl team,
                                                      I wish to correct my last email to this list.  I went to check my ppm after trying to install Bioperl 1.5.9_1 and when I clicked the view installed packages tab the Bioperl 1.5.9_1 Bioinformatics toolkit disappeared.  So The new bioperl candidate has not been installed correctly and was aborted.  The following messages appeared in the STATUS tab after I tried to reinstall it;

Synchronizing Database ... 
  Downloading ActiveState Package Repository packlist ... done
  Updating ActiveState Package Repository database ... done
  Downloading BioPerl-Regular Releases packlist ... not modified
  Downloading Kobes packlist ... done
  Updating Kobes database ... done
  Downloading Bribes  packlist ... not modified
  Downloading tcool packlist ... not modified
  Downloading tcool packlist ... done
  Downloading BioPerl-Release Candidates packlist ... not modified
Synchronizing Database done
Synchronizing Database ... 
  Downloading ActiveState Package Repository packlist ... not modified
Synchronizing Database done
BioPerl marked for install
BioPerl depends on Bundle-BioPerl-Core
BioPerl depends on Math-Random
BioPerl depends on SVG-Graph
BioPerl depends on Bio-ASN1-EntrezGene
BioPerl depends on Data-Stag
BioPerl depends on Algorithm-Munkres
BioPerl depends on GraphViz
BioPerl depends on XML-Writer
BioPerl depends on Graph
BioPerl depends on XML-DOM-XPath
BioPerl depends on PostScript
BioPerl depends on Spreadsheet-ParseExcel
BioPerl depends on XML-SAX
BioPerl depends on AcePerl
BioPerl depends on Array-Compare
BioPerl depends on Convert-Binary-C
BioPerl depends on XML-Twig
BioPerl depends on Set-Scalar
BioPerl depends on libxml-perl
BioPerl depends on XML-SAX-Writer
BioPerl depends on Clone
BioPerl depends on DB_File
BioPerl depends on SVG
BioPerl depends on Math-Derivative
BioPerl depends on Math-Spline
BioPerl depends on Statistics-Descriptive
BioPerl depends on Tree-DAG_Node
BioPerl depends on IPC-Run
BioPerl depends on XML-DOM
BioPerl depends on XML-XPathEngine
BioPerl depends on IO-stringy
BioPerl depends on OLE-Storage_Lite
BioPerl depends on Ocsinventory-Agent
BioPerl depends on Cache-Cache
BioPerl depends on Text-Iconv
BioPerl depends on XML-Filter-BufferText
BioPerl depends on XML-NamespaceSupport
BioPerl depends on XML-RegExp
BioPerl depends on Error
Installing 40 packages ... 
  Downloading BioPerl-1.5.9_1 ... done
Installing 40 packages failed

ERROR: Aborted download (3777719 bytes expected, got 1419656).


Thank You. 
Wesley Arthur.





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