[Bioperl-l] Fwd: purge method of Bio::Align::AlignI

[Mark A. Jensen]

So Laura, you would do

$alnio = new Bio::AlignIO(-file='myalign.fas', -format='fasta')
# or whatever format you please
$aln = $alnio->next_aln; 
# this gives you your myalign.fas in $aln, a Bio::SimpleAlign object
# then do

$purged_ones = $aln->purge(0.75);

cheers MAJ