[Bioperl-l] Bio::*Taxonomy* changes (Chris Fields)

Chris Fields cjfields at uiuc.edu
Fri Jul 28 15:27:17 UTC 2006


> It is a general algorithm I devised that takes a set of paths and
> builds up a tree. The input paths are full lineages coming from
> Bio::DB::Taxonomy, the output tree is a Bio::Tree::Tree. This is why
> I said I don't know exactly where it would belong, it looks to me
> more like a standalone script than a Bio::Taxonomy or Bio::Tree method.
> 
> Gabriel

Agreed.  You could submit the script as an example here if it is short, or
via Bugzilla as an enhancement request:

http://bugzilla.open-bio.org/

It could be added to the scripts\ or examples\ directory in bioperl-core.

Chris





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