[Bioperl-l] Blast returns result, but does not return hits

[Raghunath Verabelli]

Thanks very much Chris for your time.
Please see below output that you requested (the only
difference i saw between your output and mine is @INC
value. I have only 2 directories c:\mod_perl\perl
where i installed activeperl. I see two additional
directories in your @INC path).

>  
> When you type 'perl -V' what do you see (make sure
> it is a capital 'V', not
> lower case).

C:\Documents and Settings\Administrator>perl  -V
Summary of my perl5 (revision 5 version 8 subversion
7) configuration:
  Platform:
    osname=MSWin32, osvers=5.0,
archname=MSWin32-x86-multi-thread
    uname=''
    config_args='undef'
    hint=recommended, useposix=true, d_sigaction=undef
    usethreads=define use5005threads=undef
useithreads=define usemultiplicity=de
fine
    useperlio=define d_sfio=undef uselargefiles=define
usesocks=undef
    use64bitint=undef use64bitall=undef
uselongdouble=undef
    usemymalloc=n, bincompat5005=undef
  Compiler:
    cc='cl', ccflags ='-nologo -Gf -W3 -MD -Zi
-DNDEBUG -O1 -DWIN32 -D_CONSOLE -
DNO_STRICT -DHAVE_DES_FCRYPT -DNO_HASH_SEED
-DUSE_SITECUSTOMIZE -DPERL_IMPLICIT_
CONTEXT -DPERL_IMPLICIT_SYS -DUSE_PERLIO
-DPERL_MSVCRT_READFIX',
    optimize='-MD -Zi -DNDEBUG -O1',
    cppflags='-DWIN32'
    ccversion='12.00.8804', gccversion='',
gccosandvers=''
    intsize=4, longsize=4, ptrsize=4, doublesize=8,
byteorder=1234
    d_longlong=undef, longlongsize=8,
d_longdbl=define, longdblsize=10
    ivtype='long', ivsize=4, nvtype='double',
nvsize=8, Off_t='__int64', lseeksi
ze=8
    alignbytes=8, prototype=define
  Linker and Libraries:
    ld='link', ldflags ='-nologo -nodefaultlib -debug
-opt:ref,icf  -libpath:"C:
\mod_perl\Perl\lib\CORE"  -machine:x86'
    libpth=\lib
    libs=  oldnames.lib kernel32.lib user32.lib
gdi32.lib winspool.lib  comdlg32
.lib advapi32.lib shell32.lib ole32.lib oleaut32.lib 
netapi32.lib uuid.lib ws2_
32.lib mpr.lib winmm.lib  version.lib odbc32.lib
odbccp32.lib msvcrt.lib
    perllibs=  oldnames.lib kernel32.lib user32.lib
gdi32.lib winspool.lib  comd
lg32.lib advapi32.lib shell32.lib ole32.lib
oleaut32.lib  netapi32.lib uuid.lib
ws2_32.lib mpr.lib winmm.lib  version.lib odbc32.lib
odbccp32.lib msvcrt.lib
    libc=msvcrt.lib, so=dll, useshrplib=yes,
libperl=perl58.lib
    gnulibc_version='undef'
  Dynamic Linking:
    dlsrc=dl_win32.xs, dlext=dll, d_dlsymun=undef,
ccdlflags=' '
    cccdlflags=' ', lddlflags='-dll -nologo
-nodefaultlib -debug -opt:ref,icf  -
libpath:"C:\mod_perl\Perl\lib\CORE"  -machine:x86'


Characteristics of this binary (from libperl):
  Compile-time options: MULTIPLICITY USE_ITHREADS
USE_LARGE_FILES
                        USE_SITECUSTOMIZE
PERL_IMPLICIT_CONTEXT
                        PERL_IMPLICIT_SYS
  Locally applied patches:
        ActivePerl Build 815 [211909]
        Iin_load_module moved for compatibility with
build 806
        PerlEx support in CGI::Carp
        Less verbose ExtUtils::Install and Pod::Find
        instmodsh upgraded from
ExtUtils-MakeMaker-6.25
        Patch for CAN-2005-0448 from Debian with
modifications
        Upgrade to Time-HiRes-1.76
        25774 Keys of %INC always use forward slashes
        25747 Accidental interpolation of $@ in
Pod::Html
        25362 File::Path::mkpath resets errno
        25181 Incorrect (X)HTML generated by Pod::Html
        24999 Avoid redefinition warning for MinGW
        24699 ICMP_UNREACHABLE handling in Net::Ping
        21540 Fix backward-compatibility issues in
if.pm
  Built under MSWin32
  Compiled at Nov  2 2005 08:44:52
  %ENV:
    PERL5LIB="c:\bioperl-live"
  @INC:
    c:\bioperl-live
    C:/mod_perl/Perl/lib
    C:/mod_perl/Perl/site/lib
    .



__________________________________________________
Do You Yahoo!?
Tired of spam?  Yahoo! Mail has the best spam protection around 
http://mail.yahoo.com