[Bioperl-l] Re: [Bioperl-guts-l] please can anyone help me..

[Jason Stajich]

Can you at least tell folks on the list what you tried?  Did you  
follow the directions to download nmake.exe and try it?

My suspicion is this s only going to work if you have a unix-like  
environment on your windows machine, something like Cygwin.


Please direct this question to the bioperl-l at bioperl.org list for  
more help as there will hopefully be Bioperl users with windows  
experience that can help.

-jason

On Oct 21, 2005, at 9:59 PM, Tahira Farid wrote:

>
> hi...I need the bioperl -exe package because i want to use   
> Bio::Tools::dpAlign for smith waterman alignmnet.
>
> I just want to know how to install the additional bioperl packages  
> like bioperl -exe so that i can use smith waterman local alignment.
>
> thanks
>
>
>
>> From: Jason Stajich <jason.stajich at duke.edu>
>> To: Tahira Farid <tahirafarid81 at hotmail.com>
>> CC: bioperl-guts-l at portal.open-bio.org
>> Subject: Re: [Bioperl-guts-l] please can anyone help me..
>> Date: Fri, 21 Oct 2005 13:20:23 -0400
>>
>> Are you sure you really want to install this package!!!!!!!!     
>> What  did you already do!!!!!  You read that you need to use  
>> nmake, so what  happens when you use nmake?!!!!!
>>
>>
>> On Oct 21, 2005, at 11:49 AM, Tahira Farid wrote:
>>
>>
>>> Hi please someone help me. I hv not got any replies  
>>> yet....!!!!!!!!!!
>>>
>>>
>>> .I have windows xp and i have successfully installed active perl   
>>> 5.8 and the bioperl core. but i need some help in installing the   
>>> bioperl-ext package. there r lots of information available  
>>> online  but it is very scattered. i read i have to use nmake.exe  
>>> to install  the bioperl-ext. and I have also download the bioperl- 
>>> ext zip file  from bioperl.org.
>>>
>>>
>>> please can anyone help me out ini installing the package. I  
>>> would  really appreciate ur help.
>>>
>>> thanks.
>>>
>>>
>>> _______________________________________________
>>> Bioperl-guts-l mailing list
>>> Bioperl-guts-l at portal.open-bio.org
>>> http://portal.open-bio.org/mailman/listinfo/bioperl-guts-l
>>>
>>>
>>
>> --
>> Jason Stajich
>> Duke University
>> http://www.duke.edu/~jes12
>>
>>
>>
>
>
>

--
Jason Stajich
Duke University
http://www.duke.edu/~jes12/