FW: [Bioperl-l] Program

Barry Moore bmoore at genetics.utah.edu
Tue Nov 22 11:27:15 EST 2005


Manish,

That comes from NCBI which is separate from the Bioperl project.

http://www.ncbi.nlm.nih.gov/BLAST/download.shtml

Barry

> > -----Original Message-----
> > From: bioperl-l-bounces at portal.open-bio.org [mailto:bioperl-l-
> > bounces at portal.open-bio.org] On Behalf Of Manish Kumar
> > Sent: Tuesday, November 22, 2005 4:48 AM
> > To: bioperl-l at bioperl.org
> > Subject: [Bioperl-l] Program
> >
> > Hello,
> >            I am Manish Kumar n I m M.Sc
> > (Bioinfomatics) student n i need the perl program for
> > BLAST. I mean what is the program for BLAST that it
> > gives this type of results.
> >
> >
> > For example:-
> > Score = 40.1 bits (20),  Expect = 0.16
> > Identities = 23/24 (95%), Gaps = 0/24 (0%)
> > Strand=Plus/Minus
> >
> > Query  1     ATGTGTACGTGCGTGGTTACGTGC  24
> >              ||||||||||| ||||||||||||
> > Sbjct  8466  ATGTGTACGTGTGTGGTTACGTGC  8443
> >
> > The above is an example of the BLAST output. Now i
> > need the program for this output.
> > thanking you
> > Best Regards
> > Manish
> >
> >
> >
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