[Bioperl-l] (no subject)

Jason Stajich jason.stajich at duke.edu
Tue Mar 8 08:21:07 EST 2005


get the features with Bio::Tools::GFF
read in the sequence with Bio::SeqIO
call $seq->add_SeqFeature will all the features you got from 
Bio::Tools::GFF
write out the sequence with its new features with Bio::SeqIO using the 
'genbank' format.

-jason
--
Jason Stajich
jason.stajich at duke.edu
http://www.duke.edu/~jes12/

On Mar 8, 2005, at 6:15 AM, mail2doreen at gmx.de wrote:

> Hello all,
>
> i need to train a gene prediction programm and for that i have to 
> convert
> a multi gff file into genbank format!
> Does anyone know a programm to use for that?
>
> Many thanks
>
> -- 
> SMS bei wichtigen e-mails und Ihre Gedanken sind frei ...
> Alle Infos zur SMS-Benachrichtigung: http://www.gmx.net/de/go/sms
> _______________________________________________
> Bioperl-l mailing list
> Bioperl-l at portal.open-bio.org
> http://portal.open-bio.org/mailman/listinfo/bioperl-l
>
-------------- next part --------------
A non-text attachment was scrubbed...
Name: PGP.sig
Type: application/pgp-signature
Size: 186 bytes
Desc: This is a digitally signed message part
Url : http://portal.open-bio.org/pipermail/bioperl-l/attachments/20050308/5094cb13/PGP.bin


More information about the Bioperl-l mailing list