[Bioperl-l] problems during installation

Leonardo Kenji Shikida shikida at gmail.com
Fri Jun 24 10:59:46 EDT 2005


trying to install using perl -MCPAN -e "install Bundle::BioPerl" in a
suse 9.3 box

how should I proceed? 

>>>>>>>>

  CPAN.pm: Going to build L/LD/LDS/GD-2.19.tar.gz

NOTICE: This module requires libgd 2.0.28 or higher.
        it will NOT work with earlier versions. If you are getting
        compile or link errors, then please get and install a new
        version of libgd from www.boutell.com. Do NOT ask Lincoln
        for help until you try this.

        If you are using Math::Trig 1.01 or lower, it has a bug that
        causes a "prerequisite not found" warning to be issued.  You may
        safely ignore this warning.

        Type perl Makefile.PL -h for command-line option summary

Configuring for libgd version 2.0.32.
Included Features:          GD_XPM GD_JPEG GD_FONTCONFIG GD_FREETYPE GD_PNG GD_G
IF
GD library used from:       /usr

If you experience compile problems, please check the @INC, @LIBPATH and @LIBS
arrays defined in Makefile.PL and manually adjust, if necessary.

Checking if your kit is complete...
Looks good
Writing Makefile for GD
cp GD/Polyline.pm blib/lib/GD/Polyline.pm
cp qd.pl blib/lib/qd.pl
cp GD.pm blib/lib/GD.pm
AutoSplitting blib/lib/GD.pm (blib/lib/auto/GD)
cp GD/Simple.pm blib/lib/GD/Simple.pm
/usr/bin/perl /usr/lib/perl5/5.8.6/ExtUtils/xsubpp  -typemap /usr/lib/perl5/5.8.
6/ExtUtils/typemap -typemap typemap  GD.xs > GD.xsc && mv GD.xsc GD.c
cc -c  -I/usr/include -D_REENTRANT -D_GNU_SOURCE -DTHREADS_HAVE_PIDS -DDEBUGGING
 -fno-strict-aliasing -pipe -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -O2 -marc
h=i586 -mcpu=i686 -fmessage-length=0 -Wall -g -Wall -pipe   -DVERSION=\"2.19\" -
DXS_VERSION=\"2.19\" -fPIC "-I/usr/lib/perl5/5.8.6/i586-linux-thread-multi/CORE"
  -DHAVE_JPEG -DHAVE_FT -DHAVE_XPM -DHAVE_GIF -DHAVE_PNG -DHAVE_FONTCONFIG GD.c
GD.xs:7:16: gd.h: No such file or directory
GD.xs:8:21: gdfontg.h: No such file or directory
GD.xs:9:21: gdfontl.h: No such file or directory
GD.xs:10:22: gdfontmb.h: No such file or directory


-- 

[]

Kenji
_______________________
http://kenjiria.blogspot.com 
http://gaitabh.blogspot.com



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