[Bioperl-l] gff to embl or genbank

[Jianli Dai]

I am trying to combine a gff file and a fasta to an
embl or genbank file. I have tried Marc Logghe's
suggestion
(http://portal.open-bio.org/pipermail/bioperl-l/2004-June/016247.html).
It converts every exon into 1 feature. I want to
combined them into 1 gene which has several locations
of exons. I have tried to put exons into a
Bio::SeqFeature::Gene::GeneStructure object and then
add_SeqFeature to the Bio::SeqIO fasta sequence. It
gave me this error:"MSG:
Bio::SeqFeature::Generic=HASH(0x8012b8) does not
implement Bio::SeqFeature::Gene::ExonI". Please help.
Jianli



		
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