[Bioperl-l] Re: Quick bio::graphics question

[Lincoln Stein]

Hi Tim,

Sorry it took so long for me to respond, but I've been traveling and reading 
my e-mail intermittently.  If you create a feature that starts and stops in 
chromosomal coordinates, rather than going from 1 to $length, then the ruler 
will show the appropriate coordinates.  Simple, eh?

I hope this fixes your problem.

Lincoln

On Thursday 22 April 2004 09:41 am, Tim Nugent wrote:
> Hi Lincoln,
>
> Quick bio::graphics question. How can I get the ruler to show actual
> chromosomal coordinates rather than 0 to the end of panel in 10K
> increments?
>
> Cheers,
>
> Tim
>
> 	my $full_length = Bio::SeqFeature::Generic->new(-start=>1,
>
> -end=>$length);
>
> 	$panel->add_track($full_length,
> 			      -glyph   => 'arrow',
> 			      -tick    => 2,
> 			      -fgcolor => 'black',
> 			      -double  => 1
> 			  );

-- 
Lincoln Stein
lstein at cshl.edu
Cold Spring Harbor Laboratory
1 Bungtown Road
Cold Spring Harbor, NY 11724
(516) 367-8380 (voice)
(516) 367-8389 (fax)