[Bioperl-l] modified Fasta-Headers?

[Andreas Boehm]

Hi,

> Are your sure that's not the "normal" nr header with ^A (^A => oct001 =>
> \001) seperated chunks from different sources?

No. Take a look:
 >gi|84670|pir||B27257 coagulogen II precursor - horseshoe crab =
(Tachypleus tridentatus)=01gi|10809 (X04192) coagulogen type II =
[Tachypleus tridentatus]=01gi|217395|gnl|PID|d1000491 (D00077) =
coagulogen type 2 [Tachypleus tridentatus]=01gi|356167|prf||1208319A =
coagulogen [Tachypleus sp.] [MASS=3D21826]
MEKKLFGIALLLTTVASVLAADTNAPICLCDEPGVLGRTQIVTTEIKDKIEKAVEAVAQESGVSGRGFSIFSH=
HPVFREC
GKYECRTVRPEHSRCYNFPPFIHFKSECPVSTRDCEPVFGYTVAGEFRVIVQAPRAGFRQCVWQHKCRFGSNS=
CGYNGRC
TQQRSVVRLVTYNLEKDGFLCESFRTCCGCPCRSF

from horse.fasta

I do not know, what the meaning of these chr(1) should be.
Any help?


regards,
Andreas Boehm