Bioperl-run release policy Re: [Bioperl-l] Bio::Tools::Run::Alignment::Clustalw in Bioperl 1.2?

[Heikki Lehvaslaiho]

Shawn,

The page that need to be modified (and will be once 1.2.2 is out next
week) is:
  http://www.bioperl.org/Core/Latest/index.shtml


There is a more general problem: the run module is in the dowload page
but it is not announced anywhere.

In my opinion we should:

1. Include mention of the run module everywhere the main bioperl
   module is mentioned.

2. Release the run in sync with the core.

   I remember that there was some talk that the run cvs module 
   should be merged into core for releases. That has not happend
   in the 1.2 series.
   
   We've got two options:
   a) include run into 1.2.2 bioperl release
   b) Start releasing a separate Bioperl-run CPAN module, 1.2.2 next
      week being the first one.
 
	-Heikki


On Thu, 2003-07-03 at 15:46, Shawn Hoon wrote:
> These packages are in bioperl-run which now contains all the wrappers.
> 
> 
> You can download it from:
> 
> http://www.bioperl.org/DIST/bioperl-run-1.2.0.tar.gz
> 
> 
> Jason or Chris,
> 
> 	Is there some place on the bioperl website that we can put this link?
> 
> another page besides CORE?
> 
> cheers,
> 
> shawn
> 
> On Thursday, July 3, 2003, at 07:35  AM, ÑîÐ¥ÁÖ wrote:
> 
> > Dear all,
> >
> > I have installed Bioperl1.2, but i can;t find the module
> > "Bio::Tools::Run::Alignment::Clustalw" and 
> > "Bio::Tools::Run::Alignment::Tcoffee".
> > I have found these two *.pm files in bioperl-1.0.1. Can I copy them to 
> > the
> > corresponding directory to access them?
> >
> > Thank you!
> >
> > Sherin
> >
> >
> > _______________________________________________
> > Bioperl-l mailing list
> > Bioperl-l at portal.open-bio.org
> > http://portal.open-bio.org/mailman/listinfo/bioperl-l
> >
> 
> 
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-- 
______ _/      _/_____________________________________________________
      _/      _/                      http://www.ebi.ac.uk/mutations/
     _/  _/  _/  Heikki Lehvaslaiho    heikki_at_ebi ac uk
    _/_/_/_/_/  EMBL Outstation, European Bioinformatics Institute
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