[Bioperl-l] bpindex/bpfetch work for me:

[Ewan Birney]

Brian -

bpindex and bpfetch work for me (branch-1-2)


[birney at riker scripts]$ perl -I ../ index/bpindex.pl test ~/src/wise2/test_data/pep.fa 
[birney at riker scripts]$ perl -I ../ index/bpfetch.pl test:ROA1_HUMAN
>ROA1_HUMAN
SKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVT
YATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHL
RDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKAL
SKQEMASASSSQRGRSGSGNFGGGRGGGFGGNDNFGRGGNFSGRGGFGGSRGGGGYGGSG
DGYNGFGNDGGYGGGGPGYSGGSRGYGSGGQGYGNQGSGYGGSGSYDSYNNGGGRGFGGG
SGSNFGGGGSYNDFGNYNNQSSNFGPMKGGNFGGRSSGPYGGGGQYFAKPRNQGGYGGSS
SSSSYGSGRRF





What error are you getting?




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Ewan Birney. Mobile: +44 (0)7970 151230, Work: +44 1223 494420
<birney at ebi.ac.uk>. 
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