[Bioperl-l] Disabling web tests [some tests fail on Mac OS X]

Jason Stajich jason at cgt.duhs.duke.edu
Wed Dec 17 21:56:38 EST 2003


updated so they are skipped without BIOPERLDEBUG set to 1 - we may still
need to do this for DB.t, RefSeq.t, and whatever else out there is making
remote connections.

-jason

On Wed, 17 Dec 2003, Koen van der Drift wrote:

> FYI,
>
> The following tests now fail when offline (v 1.304):
>
> HNN.t
> ESEfinder.t
> GOR4.t
> Domcut.t
> Sopma.t
> MitoProt.t
> DBCUTG.t
>
>
> - Koen.
>
>
> On Dec 17, 2003, at 8:58 AM, Jason Stajich wrote:
>
> > Sounds fine to me.
> >
> > On Wed, 17 Dec 2003, Heikki Lehvaslaiho wrote:
> >
> >>
> >>
> >> I disabled web dependent tests in t/Scansite.t for the time being
> >> since they
> >> have been hanging tests.
> >>
> >> I did this so that these tests are run only if BIOPERLDEBUG is set.
> >> Is this a
> >> way forward?
> >>
> >> 	-Heikki
> >>
> >> On Tuesday 16 Dec 2003 2:30 pm, Heikki Lehvaslaiho wrote:
> >>> That is  good idea. What is the best way to do it? Is there a flag
> >>> we can
> >>> pass to Test harness or should we decide upon an environmental
> >>> variable
> >>> like "BIOPERLDEBUG"?
> >>>
> >>> 	-Heikki
> >>>
> >>> On Tuesday 16 Dec 2003 1:15 am, Jason Stajich wrote:
> >>>> We may need to think about how to set a flag for tests which should
> >>>> not
> >>>> run when no network connecion is found (or perhaps not be run as
> >>>> part of
> >>>> the default tests no matter what unless someone asks for them
> >>>> specifically - this might save a lot of future pain).
> >>
> >>
> >
> > --
> > Jason Stajich
> > Duke University
> > jason at cgt.mc.duke.edu
> >
>

--
Jason Stajich
Duke University
jason at cgt.mc.duke.edu


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