[Bioperl-l] Bio::Tools::Run::RemoteBlast: RID not found

Sergey V. Orlov serge at iem.sp.ru
Wed Aug 27 09:15:30 EDT 2003


Hi, I had got the same problem. It's caused by wrong regular expression
on line 168 in RemoteBlast.pm module.
Just change
$RIDLINE = 'RID\s+=\s+(\d+-\d+-\d+)';
to something like
$RIDLINE = 'RID\s+=\s+(\d+-\d+-\d+\.BLASTQ3)';
and it'll work.
Good luck, Serge.



More information about the Bioperl-l mailing list