installing scripts (was:Re: [Bioperl-l] GFF scripts)

Brian Osborne brian_osborne at cognia.com
Tue Aug 12 08:47:05 EDT 2003


Ewan,

* I would like to go for 1.3 developer release soonish

Yes, please. This 1.3 would have the script installation option, cleanly
separated scripts/ and examples/, and the newer, bug-free PODs (e.g.
biodatabases.pod, not biodatabases.pl).

Brian O.

-----Original Message-----
From: bioperl-l-bounces at portal.open-bio.org
[mailto:bioperl-l-bounces at portal.open-bio.org]On Behalf Of Jason Stajich
Sent: Monday, August 11, 2003 10:03 AM
To: Ewan Birney
Cc: Bioperl-l at portal.open-bio.org; Koen van der Drift
Subject: Re: installing scripts (was:Re: [Bioperl-l] GFF scripts)

I would like to go for 1.3 developer release soonish - changes from this
spring in SearchIO which Steve put into place merging psiblast and blast
parsing into the single module.  Lots of new modules on the main trunk and
I would like to see them get more testing through a dev release.
I certainly have some loose ends to tie up in the HEAD but it is shaping
up to have some nice new features.

Dev releases should be much less painful than a full stable release so I
don't see why we can't shoot for one by say the end of August?

There are only a few little changes at this point on the 1.2 branch - but
if we cleaned up any other annoying things people have now that 1.2.2 has
been out to play it could be worth the effort.

-jason

On Mon, 11 Aug 2003, Ewan Birney wrote:

>
>
> Is there a feeling that we should do a 1.2.3 release or is it more like
> starting push towards 1.3 (developer...) releases towards a 1.4.
>
>
> I don't have any strong views, though marginally more time to run after
> bugs now...
>
>
>
> -----------------------------------------------------------------
> Ewan Birney. Mobile: +44 (0)7970 151230, Work: +44 1223 494420
> <birney at ebi.ac.uk>.
> -----------------------------------------------------------------
>

--
Jason Stajich
Duke University
jason at cgt.mc.duke.edu
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