[Bioperl-l] tests failing badly

[Hilmar Lapp]

Done. -hilmar

On Monday, September 9, 2002, at 05:53  PM, Steve Chervitz wrote:

> SeqAnal.t should be renamed IUPAC.t. The Bio::Tools::SeqAnal module 
> that it
> supposedly tests is only used by Bio::Tools::Blast. SeqAnal.pm can 
> disappear
> when Blast.pm does.
>
> So you can remove the 'use Bio::Tools::SeqAnal' from this test. I 
> don't believe
> it will affect your test results, though.
>
> Steve
>
> --- Hilmar Lapp <hlapp@gnf.org> wrote:
>> I just did a cvs update ...
>>
>> Failed Test         Stat Wstat Total Fail  Failed  List of Failed
>>
> -------------------------------------------------------------------------------
>> t/AlignStats.t       255 65280    15   11  73.33%  2-3 7-15
>> t/EncodedSeq.t                    31   ??       %  ??
>> t/LocationFactory.t              131    8   6.11%  13-15 21 23-25 31
>> t/RepeatMasker.t       2   512     6    0   0.00%  ??
>> t/SeqAnal.t          255 65280     1    1 100.00%  1
>> t/Tools.t            255 65280     8    4  50.00%  5-8
>> Failed 6/105 test scripts, 94.29% okay. 18/4020 subtests failed,
>> 99.55% okay.
>>
>> Many of which have to do with alphabet setting ... I'm going to
>> investigate as I need to have this working.
>>
>> 	-hilmar
>> --
>> -------------------------------------------------------------
>> Hilmar Lapp                            email: lapp at gnf.org
>> GNF, San Diego, Ca. 92121              phone: +1-858-812-1757
>> -------------------------------------------------------------
>>
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>
>
> =====
> Steve Chervitz
> sac@bioperl.org
>
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--
-------------------------------------------------------------
Hilmar Lapp                            email: lapp at gnf.org
GNF, San Diego, Ca. 92121              phone: +1-858-812-1757
-------------------------------------------------------------