[Bioperl-l] GenericHSP methods

Wiepert, Mathieu Wiepert.Mathieu@mayo.edu
Tue, 1 Oct 2002 15:59:49 -0500


Try:

> Is there anyway currently to get the:
> -query_start

print "\t\tQuery Start: ", $hsp->query->start(), "\n";

> -query_end

print "\t\tQuery End: ", $hsp->query->end(), "\n";

> -hit_start

print "\t\tHSP Hit Start: ",$hsp->hit->start(), "\n";

> -hit_end

print "\t\tHSP Hit End: ",$hsp->hit->end(), "\n";



I can send you a test script as well if you like,

-Mat