[Bioperl-l] bioperl installation

[Georg Otto]

Hi,

I tried to install bioperl-1.0 on my Mac powerpc running Darwin 5.3

for installation i used CPAN:

cpan> install "B/BI/BIRNEY/bioperl-1.0.tar.gz"

the installation does not work and during "make test" i get the 
following error messages:

t/Biblio_biofetch...ok 3/13Warning: Couldn't connect to BioFetch 
server with Bio::DB::Medline.pm!
t/Biblio_biofetch...ok 15/13Don't know which tests failed: got 15 ok, 
expected 13


t/consed............ok 11/12-------------------- WARNING ---------------------
MSG: Bio::Tools::Alignment::Consed::count_sequences_with_grep: This 
sub uses grep which is doesn't run on this operating system, AFAIK. 
Sorry   .darwin
---------------------------------------------------
t/consed............NOK 12FAILED test 12
         Failed 1/12 tests, 91.67% okay

The latter message is strange because i have grep running on my 
system (/usr/bin/grep)
Can anyone help me to solve this problem and install bioperl?

Thanks a lot

Georg

-- 
Georg Wilhelm Otto
Max-Planck-Institute for Developmental Biology
Spemannstrasse 35/III
D-72076 Tuebingen Germany
phone: +49 7071 601 393
http://www.eb.tuebingen.mpg.de