[Bioperl-l] longest ORF

Dan Kortschak Dan Kortschak <kortschak@rsbs.anu.edu.au>
Tue, 30 Jul 2002 09:54:54 +1000 (EST)


Hi All, I'm looking to see if anyone has a small script to take a Bio::Seq
object and find the longest ORF ((+) strand or both strands).
Altenatively, is there an easy way to do this using Bio::Seq (translate
doesn't seem to take a frame for translation so I'm guessing that it
translates in frame 1 - is this right?)

thanks
Dan Kortschak

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