[Bioperl-l] TreeIO altering tree topology

Aaron J Mackey Aaron J. Mackey" <amackey@virginia.edu
Wed, 17 Jul 2002 10:14:52 -0400 (EDT)


On Wed, 17 Jul 2002, Aaron J Mackey wrote:

> Upon further inspect of the built tree, it looks like the tree itself is
> misformed (i.e. it's not an output problem).  I haven't been able to find
> what's going wrong, so I thought I'd shoot it out to the rest of you.

I've found the problem: TreeEventBuilder.pm expects only binary trees
[what, you've never heard of polytomies? ;^) ]

Working on a fix ...

-Aaron