[Open-bio-l] Re: [Bioperl-l] seq namespace method

Lincoln Stein lstein@cshl.org
Mon, 15 Jul 2002 13:15:54 -0400


Yes.

Lincoln

On Monday 15 July 2002 04:48 am, Ewan Birney wrote:
> I would claim the right pattern here is to have
>
>
>   Bio::IdentifiableI
>
> which Bio::PrimarySeqI inheriets from and Bio::PrimarySeq implements.
>
>
>   Bio::IdentifiableI would have slots for namespace, version, id (NB
> **no** type) and would be compatiable with the 13C naming convention
> thingy to produce I3C style names (so it might also have "authority" as a
> slot).
>
>
>
>
>
>
> -----------------------------------------------------------------
> Ewan Birney. Mobile: +44 (0)7970 151230, Work: +44 1223 494420
> <birney@ebi.ac.uk>.
> -----------------------------------------------------------------
>
>
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-- 
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Lincoln D. Stein                           Cold Spring Harbor Laboratory
lstein@cshl.org			                  Cold Spring Harbor, NY
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