[Bioperl-l] RichSeqI

[Hilmar Lapp]

Ewan Birney wrote:
> 
> To prove to hilmar that I am doing the RichSeqI stuff, I have committed
> the interface. Basically this is a trivial recasting of the "additional
> support" currently in Seq.pm which I will move out into
> Bio::Seq::RichSeq.pm
> 
> currently the interface looks like...
> 
> =head1 NAME
> 
> Bio::Seq::RichSeqI - RichSeq interface, mainly for database orientated
> sequences
> 
> =head1 SYNOPSIS
> 
>     @secondary   = $richseq->get_secondary_accessions;
>     $division    = $richseq->division;
>     $mol         = $richseq->molecule;
>     @dates       = $richseq->get_dates;
>     $seq_version = $richseq->seq_version;
> 
> 
> =head1 DESCRIPTION
> 
> This interface extends the Bio::SeqI interface to give additional
> functionality to sequences with richer data sources, in particular from
> database sequences (EMBL, GenBank and Swissprot).
> 
> Kris, Jason, Hilmar --- comments?
> 

Sounds good. This is really the right direction.

	Hilmar
-- 
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Hilmar Lapp                            email: lapp@gnf.org
GNF, San Diego, Ca. 92121              phone: +1-858-812-1757
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