[Bioperl-l] getting the Sbjct database from a hit

[hlapp@gmx.net]

> 
> Report is here (the database is the nr protein db from NCBI):
> http://bioweb.pasteur.fr/seqanal/tmp/blast2/20597971010913/blast2.txt
> Query is here:
> http://bioweb.pasteur.fr/seqanal/tmp/blast2/20597971010913/query.data
> 
> We run bioperl version 0.6.1 (just installed - everything indeed
> worked before...).
> 

You should be running 0.6.2 instead -- released just a few days ago.
Version 0.6.1 has numerous bugs which have been fixed in 0.6.2 - also in the
Blast parser. Let me know if the problem is still there with 0.6.2.

         Hilmar

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Hilmar Lapp                            email: hlapp@gmx.net
NFI Vienna, IFD/Bioinformatics         phone: +43 1 86634 631
A-1235 Vienna                          fax:   +43 1 86634
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