[Bioperl-l] newbie question

vastrik@mappi.helsinki.fi vastrik@mappi.helsinki.fi
Thu, 14 Dec 2000 20:53:18 +0200 (EET)


Quoting Martin Schmidt <mcs2+@pitt.edu>:

> Hi,
> I am just getting started with BioPerl and
> am unable to get any of it to compile.
> Just for starters, I have tried to use the
> restriction.pl script that comes with BioPerl
> release 6.2
> 
> I changed the line...
> use lib "/home/sac";
> 
> to
> 
> use lib "macintosh HD:MacPerl:bioperl-0.6.2:libwww-perl-5.48:lib";
> 
> and this does not give an error message.
> 
> The next line does give an error.
> 
> use Bio::Seq;
> 
> It says  "# Can't locate Bio/Seq.pm in @INC.

Either:

-make an alias of Bio folder and stick it into MacPerl/lib (or should I say 
MacPerl:lib).

or

-open 'Preferences' from MacPerl's 'Edit' menu and add the path there.

Both work for me (not that I use MacPerl much).

Rgds.,

imr