[BioLib-dev] GSL

[Pjotr Prins]

I think your master branch is clean. I'll work from there.

Pj.

On Mon, Aug 10, 2009 at 11:01:40AM +0200, Pjotr Prins wrote:
> Hi Xin,
> 
> On Fri, Aug 07, 2009 at 04:14:29PM -0400, Xin Shuai wrote:
> > I have already modified related .cmake files and tested it. It looked fine.If
> > only the problem of my last email is solved, I think I can update the
> > cmake-support submodule.
> 
> Good job :-). I can build libsequence and compile Python bindings
> now. Cool stuff. Now the final step before merging into
> release_candidate. After updating from my tree:
> 
>   git pull pjotr libsequence
>   git submodule update
> 
> add a working 'integration' test to the Python module. When you do:
> 
>   cd src/mappings/swig/python/libsequence
>   cmake .
>   make
>   make test
> 
> you'll see   1/  1 Testing TestPythonlibsequence         ***Failed 
> 
> the output is in Testing/Temporary/LastTest.log.
> 
> Currently ../test/test_libsequence.py consists of your doctests. They
> are bound to be elaborate. A biolib integration test merely makes sure
> the build system did not fail - so it usually has a few simple tests.
> 
> Rename your current doctest to ../test/doctest_libsequence.py
> 
> and create a new short test (see test_example.py) that confirms the
> libraries are linked together and the mapping just works. Same for
> the Perl module.
> 
> Once that test passes I'll merge into release_candidate so Mark (and
> perhaps others) can start testing.
> 
> Pj.
> 
> P.S. I had to revert some changes in cmake-support. Not sure why you
> changed those, but I think this is correct.
> 
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