<div dir="ltr">Hi again, <br>I was using biojava-protein-disorder-4.1.<wbr>0, when I used 4.2.6, it worked fine.<br><div class="gmail_extra"><br clear="all"><div><div class="m_3960762871099811342gmail_signature" data-smartmail="gmail_signature"><div dir="ltr"><div dir="ltr"><div dir="ltr"><br></div></div></div></div></div>
<br><div class="gmail_quote">On Thu, Mar 2, 2017 at 1:18 AM, Srikanth Bezawada <span dir="ltr"><<a href="mailto:srikanth.5283@gmail.com" target="_blank">srikanth.5283@gmail.com</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div dir="ltr">Hi BioJava,<br><br>I get the following stack trace when I try to find disorder scores using biojava protein disorder module. Can you please let me know the fix ? Thanks in advance.<br>
<div><br><br></div><div><div>Exception in thread "main" java.lang.ExceptionInInitializ<wbr>erError</div><div><span class="m_3960762871099811342m_6924561765305433247gmail-Apple-tab-span" style="white-space:pre-wrap">       </span>at biojavausage.BioJavaUsage.main<wbr>(BioJavaUsage.java:<b>25</b>)</div><div>Caused by: java.util.InputMismatchExcepti<wbr>on</div><div><span class="m_3960762871099811342m_6924561765305433247gmail-Apple-tab-span" style="white-space:pre-wrap">      </span>at java.util.Scanner.throwFor(Sca<wbr>nner.java:864)</div><div><span class="m_3960762871099811342m_6924561765305433247gmail-Apple-tab-span" style="white-space:pre-wrap">      </span>at java.util.Scanner.next(Scanner<wbr>.java:1485)</div><div><span class="m_3960762871099811342m_6924561765305433247gmail-Apple-tab-span" style="white-space:pre-wrap"> </span>at java.util.Scanner.nextInt(Scan<wbr>ner.java:2117)</div><div><span class="m_3960762871099811342m_6924561765305433247gmail-Apple-tab-span" style="white-space:pre-wrap">      </span>at java.util.Scanner.nextInt(Scan<wbr>ner.java:2076)</div><div><span class="m_3960762871099811342m_6924561765305433247gmail-Apple-tab-span" style="white-space:pre-wrap">      </span>at org.biojava.nbio.ronn.ModelLoa<wbr>der.loadModels(ModelLoader.<wbr>java:175)</div><div><span class="m_3960762871099811342m_6924561765305433247gmail-Apple-tab-span" style="white-space:pre-wrap">     </span>at org.biojava.nbio.ronn.Jronn.<c<wbr>linit>(Jronn.java:55)</div><div><span class="m_3960762871099811342m_6924561765305433247gmail-Apple-tab-span" style="white-space:pre-wrap"> </span>... 1 more</div></div><div><br></div><div><br></div><div><br></div><div><div>Here is the line <b>25</b> which is the same line from the test folder of biojava github.<br><br><div>float[]<span style="white-space:pre-wrap">   </span>rawProbabilityScores = Jronn.getDisorderScores(new FastaSequence("name", "LLRGRHLMNGTMIMRPWNFLNDHHFPKFF<wbr>PHLIEQQAIWLADWWRKKHC" +</div><div><span class="m_3960762871099811342m_6924561765305433247gmail-Apple-tab-span" style="white-space:pre-wrap">                          </span>"RPLPTRAPTMDQWDHFALIQKHWTANLWF<wbr>LTFPFNDKWGWIWFLKDWTPGSADQAQRAC<wbr>TWFFCHGHDTN" +</div><div><span class="m_3960762871099811342m_6924561765305433247gmail-Apple-tab-span" style="white-space:pre-wrap">                              </span>"CQIIFEGRNAPERADPMWTGGLNKHIIAR<wbr>GHFFQSNKFHFLERKFCEMAEIERPNFTCR<wbr>TLDCQKFPWDDP" ));</div></div></div></div>
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