<div dir="ltr">Excellent, thanks Spencer!<div><br></div><div>Andreas<br><div class="gmail_extra"><br><br><div class="gmail_quote">On Tue, Aug 26, 2014 at 2:45 AM, Spencer Bliven <span dir="ltr"><<a href="mailto:sbliven@ucsd.edu" target="_blank">sbliven@ucsd.edu</a>></span> wrote:<br>
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div dir="ltr"><div><div><div><div>== BioJava 3.1.0 <span>released</span> ==<br>
<br>
BioJava 3.1.0 was <span>released</span> on August 25th 2014 and is available from<br>
<a href="http://biojava.org/wiki/BioJava:Download" target="_blank">http://biojava.org/wiki/BioJava:Download</a> as well as from the<br>
BioJava maven repository at <a href="http://www.biojava.org/download/maven/" target="_blank">http://www.biojava.org/download/maven/</a><br></div><div><br></div>While most development is going towards the upcoming 4.0.0 release, this release provides bug fixes and a few new features:<br>
<br>* CE-CP version 1.4, with additional parameters<br>* Update to SCOPe 2.04<br>* Improvements in FASTQ parsing<br>* Fix bugs in PDB parsing<br>* Minor fixes in structure alignments<br><br>For a detailed comparison see here:<br>
<a href="https://github.com/biojava/biojava/compare/biojava-3.0.8...biojava-3.1.0" target="_blank">https://github.com/biojava/biojava/compare/biojava-3.0.8...biojava-3.1.0</a><br><br></div>This version is compatible with Java 6 and 7. If you're using Java 8, please use the latest snapshot build. Snapshots are now available from Maven central just by setting your pom.xml file to version '4.0.0-SNAPSHOT'!<br>
<br></div>Thanks to the contributors who submitted code to this release–heuermh, Elinow, Siarhei, sbliven and andreasprlic–and to those who contributed to the 4.0.0 branch!<br><br><br>
About BioJava:<br>
<br>
BioJava is a mature open-source project that provides a framework for<br>
processing of biological data. BioJava contains powerful analysis and<br>
statistical routines, tools for parsing common file formats, and<br>
packages for manipulating sequences and 3D structures. It enables<br>
rapid bioinformatics application development in the Java programming<br>
language.<br><br><br></div><div>Cheers,<br><br>Spencer<br></div></div>
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