[Biojava-l] QBlast in BioJava3

Andreas Prlic andreas at sdsc.edu
Wed Dec 29 17:58:43 UTC 2010


Thanks Sylvain,

Matthew, a workaround until we have a fix for this is to add the
http://biojava.org/download/maven/org/biojava/core/1.8/core-1.8.jar
from the biojava-legacy project to your classpath. This should allow
your example to work...

Andreas


On Wed, Dec 29, 2010 at 9:22 AM, Sylvain Foisy Ph. D.
<sylvain.foisy at diploide.net> wrote:
> Hi,
>
> I am the author/main culprit for the QBlast code in BJ. I have to fix the problem that you found ASAP to remove the dependency on the old BJ architecture about representing Sequence objects. I'll work on this early next week, as soon as I'll have finish with my grading... I am more of a teacher than a coder nowadays.
>
> Best regards
>
> Sylvain
>
>
>
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