[Biojava-l] problem in initialising DNATools

Richard Holland holland at ebi.ac.uk
Thu Jun 28 07:53:44 UTC 2007


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Hello.

If you downloaded a binary version make sure it's the latest one from
biojava.org and the download was completed OK.

If you are compiling BioJava from source, make sure you have compiled
BioJava correctly using the supplied ant file. The command is 'ant' (no
task name required).

In both cases, you should check that all the JAR files in biojava/lib
are in your program's classpath, including the biojava.jar file. (It
won't work if you only include the source tree in the classpath, it must
have the JAR file.)

cheers,
Richard

Kavita Agarwal wrote:
> Hi!
>    
>   I am using biojava1.5 in jdk1.5.0.
>    
>   In my applet when I use createDNA function to convert sequence retrived from textbox into dna ,I get the error:-
>    
>   >Unable to initialise DNATools 
>    
>   and also..
>    
>   >Couldn,t locate AlphabetManager.xml
>   >This pribably means that your biojava file is corrupt or incorrectly built.
>    
>   I have unzipped the biojava1.5  and found AlphabetManager.xml in or->bio>symbol.
>    
>   What should I do to remove this error.
>    
> 
>  
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