<div dir="ltr"><div><div>Ido-<br><br></div>You need to pass the correct Table object to the RNAToAminoAcidTranslator constructor. A bunch of standard tables are provided with biojava-core in <a href="https://github.com/biojava/biojava/blob/master/biojava-core/src/main/resources/org/biojava/nbio/core/sequence/iupac.txt">iupac.txt</a> and are accessable through the IUPACParser. If your amber suppressor isn't included, you can use the <a href="http://www.biojava.org/docs/api/index.html?org/biojava/nbio/core/sequence/io/IUPACParser.IUPACTable.html">IUPACTable</a> subclass to specify your own.<br><br></div>-Spencer<br></div><div class="gmail_extra"><br><div class="gmail_quote">On Thu, Mar 5, 2015 at 1:43 PM, Ido Tamir <span dir="ltr"><<a href="mailto:tamir@imp.ac.at" target="_blank">tamir@imp.ac.at</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">Hi,<br>
how do I modify a translation table in biojava 1.7?<br>
I need to encode an amber suppressor.<br>
<br>
thank you very much,<br>
ido<br>
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