[Biojava-dev] Fw: Locale-sensitive PDB header produced

Amr AL-Hossary amr_alhossary at hotmail.com
Wed Sep 14 14:20:22 UTC 2011


The previous issue was "mail server (hotmail) rejection"
but this time, I don't know.
Seems like encoding issue.
I used "Arabic(Windows)" encoding & "plain text" format and it worked

Amr

--------------------------------------------------
From: "Andreas Prlic" <andreas at sdsc.edu>
Sent: Wednesday, September 14, 2011 7:31 AM
To: "Amr AL-Hossary" <amr_alhossary at hotmail.com>
Cc: <biojava-dev at lists.open-bio.org>
Subject: Re: [Biojava-dev] Fw: Locale-sensitive PDB header produced

> Thanks for the fix Amr, good point about the standard locale.
>
> Not sure why your mail did not come through at first attempt. Didn't
> you have email sending issues before? I did not see anything coming in
> server-side. Perhaps worth trying a different email/provider?
>
> Andreas
>
> 2011/9/13 Amr AL-Hossary <amr_alhossary at hotmail.com>:
>> Dear Dr. Andreas
>> I sent this email twice to the group before but it wasn't received, nor a
>> rejection notification returned
>> Do you have any clues?
>> --------------------------------------------------
>> From: "Amr AL-Hossary" <amr_alhossary at hotmail.com>
>> Sent: Tuesday, September 13, 2011 6:41 PM
>> To: <biojava-dev at lists.open-bio.org>
>> Subject: Fw: Locale-sensitive PDB header produced
>>
>>> While building Snapshot, the org.biojava.bio.structure.PDBFileParserTest
>>> failed;
>>> because of the regional settings on my PC where month names are written 
>>> in
>>> Arabic.
>>>
>>> The test string was
>>> HEADER COMPLEX (SERINE PROTEASE/INHIBITORS) 06-FEB-98 1A4W
>>> while the produced Header was
>>> HEADER COMPLEX (SERINE PROTEASE/INHIBITORS) 06-فبر-98 1A4W
>>>
>>> So I changed all SimpleDateFormat constructors in Biojava 3 to be
>>> explicitly tied to the US Locale.
>>>
>>> Please all stick to specifying fixed locale in any further development
>>>
>>> Amr
>>
>>
>
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> biojava-dev at lists.open-bio.org
> http://lists.open-bio.org/mailman/listinfo/biojava-dev
> 



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