[Biojava-dev] Alignment GUI and Netbeans[Scanned]

Jolyon Holdstock jolyon.holdstock at ogt.co.uk
Fri May 14 13:35:20 UTC 2010


Hi Rad,

 

If you draw the alignment in a TranslatedSequencePanel that can be treated as a JPanel
 
What do you want to do with the JPanel?
 
Cheers,
 
J
 

 

From: Radwen Aniba [mailto:aradwen at gmail.com] 
Sent: 14 May 2010 12:06
To: Jolyon Holdstock
Cc: biojava-dev at lists.open-bio.org
Subject: Re: [Biojava-dev] Alignment GUI and Netbeans[Scanned]

 

What I want to do is to render an MSA (just like the example given in the link) But instead of creating a panel, I just want my alignment drawn in JPanel

But I don't see how can I modify this code yet



2010/5/14 Jolyon Holdstock <jolyon.holdstock at ogt.co.uk>

Hi Rad,

The TranslatedSequencePanel class extends JComponent and so does the
JPanel class.

Whatever you want to do with the JPanel can be done directly with the
TranslatedSequencePanel.

So you can create a TranslatedSequencePanel, add whatever components you
want and then use it in your application the same way as you would use a
JPanel.

Is this what you need to know?

Jolyon



-----Original Message-----
From: Radwen Aniba [mailto:aradwen at gmail.com]
Sent: 14 May 2010 11:35
To: biojava-dev at lists.open-bio.org
Subject: [Biojava-dev] Alignment GUI and Netbeans[Scanned]

Hello everybody

I've Just took a look at
http://www.biojava.org/wiki/BioJava:CookBook:Interfaces:Alignments_II

And i'm calling your developpers experiences.
I would like to adapt this code to put AlignmentPanel_II inside a Panel
using netbeans

Could someone tell me how to proceed ? just the first steps
(illustrations
would be a plus)

Thanks

Rad

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-- 
R. ANIBA

Bioinformatics PhD
Laboratoire de Bioinformatique et Génomique Intégratives,
Institut de Génétique et de Biologie Moléculaire et Cellulaire (IGBMC),
1 rue Laurent Fries,
67404 Illkirch, France.
http://www-igbmc.u-strasbg.fr
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