[Biojava-dev] [Bug 2971] New: Nexus parser fails to parse internal node names

bugzilla-daemon at portal.open-bio.org bugzilla-daemon at portal.open-bio.org
Thu Dec 17 17:52:38 UTC 2009


http://bugzilla.open-bio.org/show_bug.cgi?id=2971

           Summary: Nexus parser fails to parse internal node names
           Product: BioJava
           Version: live (CVS source)
          Platform: All
        OS/Version: All
            Status: NEW
          Severity: normal
          Priority: P2
         Component: Others
        AssignedTo: biojava-dev at biojava.org
        ReportedBy: tiagoantao at gmail.com


The Ancestor1 below is not parsed correctly.

Begin TREES;
   tree test2 = (B:6.0,(A:5.0,C:3.0,E:4.0)
Ancestor1:5.0,D:11.0);
End;

Internal node names (as opposed to leaves) are not correctly processed.


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