[Biojava-dev] Feature Templates

[Schreiber, Mark]

Hi - 
 
There are not really any strict coding standards, well none that are enforcable anyway :-) A lot seems to depend on the developers IDE or editor. Mostly the code looks OK. I have tidied SimpleFeature a bit.
 
One possibility would be to run all of the code through a template from time to time which would not be hard with a modern IDE but would make a bit of a hit on the CVS when it happened. Matthew did the last one where he changed the code to use explicit imports.
 
- Mark
 

	-----Original Message----- 
	From: Len Trigg [mailto:len at reeltwo.com] 
	Sent: Mon 8/09/2003 3:55 p.m. 
	To: Schreiber, Mark 
	Cc: Matthew Pocock; biojava-dev at biojava.org 
	Subject: Re: [Biojava-dev] Feature Templates
	
	

	Mark Schreiber wrote:
	> I think that a copy is better than a reference. The question is
	> would a shallow copy be OK or should it be a deep copy?
	
	I have changed the SimpleFeature constructor so that rather than
	directly referencing the template annotation, it uses the existing
	SimpleAnnotation(Annotation) constructor. If deep copies are the way
	to go, it should probably happen in that constructor.
	
	BTW: SimpleFeature could do with a pretty printer running over
	it... Are there BioJava coding conventions? (I've been going with the
	flow of whichever file I've been editing.)
	
	
	Cheers,
	Len.
	
	


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