[Biojava-dev] Ontology move breakage.

Len Trigg len at reeltwo.com
Wed Aug 6 13:52:49 EDT 2003



Exception in thread "main" org.biojava.utils.AssertionFailure:
Couldn't find class or field org.biojava.bio.ontology.Ontology->TERM
        at org.biojava.utils.ChangeType.<init>(ChangeType.java:162)
        at org.biojava.utils.ChangeType.<init>(ChangeType.java:171)
        at org.biojava.ontology.Ontology.<clinit>(Ontology.java:54)
        at org.biojava.ontology.Ontology$Impl.addTerm(Ontology.java:302)
        at org.biojava.ontology.Ontology$Impl.createTerm(Ontology.java:321)
        at org.biojava.bio.seq.db.biosql.BioSQLSequenceDB.intern_ontology_term(BioSQLSequenceDB.java:918)
        at org.biojava.bio.seq.db.biosql.BioSQLSequenceDB.persistBioentryProperty(BioSQLSequenceDB.java:876)
        at org.biojava.bio.seq.db.biosql.BioSQLSequenceDB._addSequence(BioSQLSequenceDB.java:440)
        at org.biojava.bio.seq.db.biosql.BioSQLSequenceDB.addSequence(BioSQLSequenceDB.java:305)

Now fixed in CVS. Someone owes me a beer :-)

Cheers,
Len.


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